Papers
2007 2006 2005 2004 2003 2002 2001 2000 1999 1998 1997 1996 1995 1994 1993 1992 1991 1990 1989
- Bandeira N, Tang H, Bafna V, Pevzner P.
Shotgun protein sequencing by tandem mass spectra assembly.
Anal Chem. 2004 Dec 15;76(24):7221-33.
- Murphy WJ, Pevzner PA, O'Brien SJ.
Mammalian phylogenomics comes of age.
Trends Genet. 2004 Dec;20(12):631-9. Review.
- Raphael B, Zhi D, Tang H, Pevzner P.
A novel method for multiple alignment of sequences with repeated and shuffled elements.
Genome Res. 2004 Nov;14(11):2336-46.
- Price AL, Eskin E, Pevzner PA.
Whole-genome analysis of Alu repeat elements reveals complex evolutionary history.
Genome Res. 2004 Nov;14(11):2245-52.
- Pevzner PA.
Educating biologists in the 21st century: bioinformatics scientists versus bioinformatics technicians.
Bioinformatics. 2004 Sep 22;20(14):2159-61. Epub 2004 Apr 8.
- Chaisson M, Pevzner P, Tang H.
Fragment assembly with short reads.
Bioinformatics. 2004 Sep 1;20(13):2067-74. Epub 2004 Apr 1.
- Pevzner PA, Tang H, Tesler G.
De novo repeat classification and fragment assembly.
Genome Res. 2004 Sep;14(9):1786-96. Erratum in: Genome Res. 2004 Dec;14(12):2510. Pevzner, Paul A [corrected to Pevzner, Pavel A].
PMID: 15342561 [PubMed - indexed for MEDLINE]
- Raphael BJ, Pevzner PA.
Reconstructing tumor amplisomes.
Bioinformatics. 2004 Aug 4;20 Suppl 1:i265-73.
- Leipzig J, Pevzner P, Heber S.
The Alternative Splicing Gallery (ASG): bridging the gap between genome and transcriptome.
Nucleic Acids Res. 2004 Aug 3;32(13):3977-83. Print 2004.
- Andelfinger G, Hitte C, Etter L, Guyon R, Bourque G, Tesler G, Pevzner P, Kirkness E, Galibert F, Benson DW.
Detailed four-way comparative mapping and gene order analysis of the canine ctvm locus reveals evolutionary chromosome rearrangements.
Genomics. 2004 Jun;83(6):1053-62.
- Bourque G, Pevzner PA, Tesler G.
Reconstructing the genomic architecture of ancestral mammals: lessons from human, mouse, and rat genomes.
Genome Res. 2004 Apr;14(4):507-16.
- Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC, Burch PE, Okwuonu G, Hines S, Lewis L, DeRamo C, Delgado O, Dugan-Rocha S, Miner G, Morgan M, Hawes A, Gill R, Celera, Holt RA, Adams MD, Amanatides PG, Baden-Tillson H, Barnstead M, Chin S, Evans CA, Ferriera S, Fosler C, Glodek A, Gu Z, Jennings D, Kraft CL, Nguyen T, Pfannkoch CM, Sitter C, Sutton GG, Venter JC, Woodage T, Smith D, Lee HM, Gustafson E, Cahill P, Kana A, Doucette-Stamm L, Weinstock K, Fechtel K, Weiss RB, Dunn DM, Green ED, Blakesley RW, Bouffard GG, De Jong PJ, Osoegawa K, Zhu B, Marra M, Schein J, Bosdet I, Fjell C, Jones S, Krzywinski M, Mathewson C, Siddiqui A, Wye N, McPherson J, Zhao S, Fraser CM, Shetty J, Shatsman S, Geer K, Chen Y, Abramzon S, Nierman WC, Havlak PH, Chen R, Durbin KJ, Egan A, Ren Y, Song XZ, Li B, Liu Y, Qin X, Cawley S, Worley KC, Cooney AJ, D'Souza LM, Martin K, Wu JQ, Gonzalez-Garay ML, Jackson AR, Kalafus KJ, McLeod MP, Milosavljevic A, Virk D, Volkov A, Wheeler DA, Zhang Z, Bailey JA, Eichler EE, Tuzun E, Birney E, Mongin E, Ureta-Vidal A, Woodwark C, Zdobnov E, Bork P, Suyama M, Torrents D, Alexandersson M, Trask BJ, Young JM, Huang H, Wang H, Xing H, Daniels S, Gietzen D, Schmidt J, Stevens K, Vitt U, Wingrove J, Camara F, Mar Alba M, Abril JF, Guigo R, Smit A, Dubchak I, Rubin EM, Couronne O, Poliakov A, Hubner N, Ganten D, Goesele C, Hummel O, Kreitler T, Lee YA, Monti J, Schulz H, Zimdahl H, Himmelbauer H, Lehrach H, Jacob HJ, Bromberg S, Gullings-Handley J, Jensen-Seaman MI, Kwitek AE, Lazar J, Pasko D, Tonellato PJ, Twigger S, Ponting CP, Duarte JM, Rice S, Goodstadt L, Beatson SA, Emes RD, Winter EE, Webber C, Brandt P, Nyakatura G, Adetobi M, Chiaromonte F, Elnitski L, Eswara P, Hardison RC, Hou M, Kolbe D, Makova K, Miller W, Nekrutenko A, Riemer C, Schwartz S, Taylor J, Yang S, Zhang Y, Lindpaintner K, Andrews TD, Caccamo M, Clamp M, Clarke L, Curwen V, Durbin R, Eyras E, Searle SM, Cooper GM, Batzoglou S, Brudno M, Sidow A, Stone EA, Venter JC, Payseur BA, Bourque G, Lopez-Otin C, Puente XS, Chakrabarti K, Chatterji S, Dewey C, Pachter L, Bray N, Yap VB, Caspi A, Tesler G, Pevzner PA, Haussler D, Roskin KM, Baertsch R, Clawson H, Furey TS, Hinrichs AS, Karolchik D, Kent WJ, Rosenbloom KR, Trumbower H, Weirauch M, Cooper DN, Stenson PD, Ma B, Brent M, Arumugam M, Shteynberg D, Copley RR, Taylor MS, Riethman H, Mudunuri U, Peterson J, Guyer M, Felsenfeld A, Old S, Mockrin S, Collins F; Rat Genome Sequencing Project Consortium.
Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
Nature. 2004 Apr 1;428(6982):493-521.
- Kahng AB, Mandoiu II, Pevzner PA, Reda S, Zelikovsky AZ.
Scalable heuristics for design of DNA probe arrays.
J Comput Biol. 2004;11(2-3):429-47.
- Max A. Alekseyev, Pavel A. Pevzner
Genome Halving Problem Revisited.
FSTTCS 2004: 1-15
